Data
Here we released the resting state functional connectivity dataset of the patients from the 15 scanners:
(1) Resting state functional connectivity (rs-FC) matrix file ( *.mat)
- 10-min, resting state fMRI [number of participants * number of functional connectivities]
(2) Participant demographics information (SUBINFO_*.tsv) - Including ID, age, sex, hand, rate of excluded volume, number of excluded volume
(3) README file (ReadMe_*.txt) - Explaining scanning parameters and contents of demographics information for each site
(4) README file (README.txt) - Explaining contents and site information
The structure of dataset (each directory includes rs-FC file, demographic information file, and Readme file):
SRPBS_FC
├── README.txt
├── ATR
│ ├── HC
│ ├── OCD
│ └── OCD-oblique
├── Cambridge
├── CiNet
├── HiroshimaU
├── KPUM
├── KyotoU
│ ├── DEP
│ ├── HC
│ └── SSD
├── OsakaU
├── ShowaU
├── TravelingSubjects
└── UTO
├── UTO_GEMR750W_30_AAL
├── UTO_GEMR750W_30_BAL
└── UTO_GEMR750W_30_R93
Reference
Please refer to our published paper for detailed methods; preprocessing and atlas information to generate functional connectivity matrix.
- Yahata, N., Morimoto, J., Hashimoto, R. et al. A small number of abnormal brain connections predicts adult autism spectrum disorder. Nat Commun 7, 11254 (2016). https://doi.org/10.1038/ncomms11254
- Tanaka, S.C., Yamashita, A., Yahata, N. et al. A multi-site, multi-disorder resting-state magnetic resonance image database. Sci Data 8, 227 (2021). https://doi.org/10.1038/s41597-021-01004-8
Download
* MD5 hash : ca16e4049f35a51622f104d24407d59b
* As file size is large ( 175.6MB ), downloading takes time.
* This file is stored in Amazon S3 Service.
Consortium Sites
ATR
| Scanner : Siemens |
| Participants : Obsessive compulsive disorder (OCD) / Healthy controls (HC) |
| Number of Data : OCD 4 / HC 108 |
University of Tokyo
| Scanner : GE, Philips |
| Participants : Autism spectrum disorder (ASD) / Major depressive disorder (MDD) / Schizophrenia (SCZ) / Bipolar disorder (BPD) / Dysthymia / Other psychiatric disorders (Other) / Healthy controls (HC) |
| Number of Data : ASD 10 / MDD 62 / SCZ 35 / BPD 41 / Dysthymia 4 / Other 28 / HC 170 |
Osaka University
| Scanner : Siemens |
| Participants : Intractable neuropathic pain (INP) / Post-stroke without pain (PSP) / Healthy controls (HC) |
| Number of Data : INP 43 / PSP 10 / HC 29 |
Showa University
| Scanner : Siemens |
| Participants : Autism spectrum disorder (ASD) / Schizophrenia (SCZ) / Healthy controls (HC) |
| Number of Data : ASD 115 / SCZ 19 / HC 101 |
Kyoto University
| Scanner : Siemens |
| Participants : Schizophrenia (SCZ) / Depression (DEP) / Healthy controls (HC) |
| Number of Data : SCZ 92 / DEP 16 / HC 234 |
Hiroshima University
| Scanner : GE, Siemens |
| Participants : Depression (DEP) / Healthy controls (HC) |
| Number of Data : DEP 173 / HC 261 |
Collaborative Sites
Kyoto Prefectural University of Medicine (KPUM)
| Scanner : Philips |
| Participants : Obsessive compulsive disorder (OCD) |
| Number of Data : OCD 9 |
CiNet (NICT)
| Scanner : Siemens |
| Participants : Back pain / Healthy controls (HC) |
| Number of Data : 33 (Cambridge University) 63 (CiNet) |
Traveling Subjects Data
History of update
- (2021-4-15) Dataset was updated.
- (2019-11-7) CiNet data updated.
- (2018-5-31) Tokyo University data released.
- (2018-5-14) Traveling subjects data released.
- (2018-4-23) Osaka University, Showa University, Kyoto Prefectural University of Medicine data released.
- (2017-4-23) ATR data updated.
- (2018-4-13) Kyoto University data released.
- (2018-4-6) Hiroshima University data released.
- (2017-4-5) ATR data updated.
- (2017-11-21) CiNet data released.
- (2017-11-10) ATR data released.
