SRPBS
Multidisorder Connectivity Dataset
Resting state functional connectivity dataset of the patients from the 8 sites, 14 scanners.
More

Data


Here we released the resting state functional connectivity dataset of the patients from the 15 scanners:

(1) Resting state functional connectivity (rs-FC) matrix file ( *.mat)
- 10-min, resting state fMRI [number of participants * number of functional connectivities]

(2) Participant demographics information (SUBINFO_*.tsv) - Including ID, age, sex, hand, rate of excluded volume, number of excluded volume

(3) README file (ReadMe_*.txt) - Explaining scanning parameters and contents of demographics information for each site

(4) README file (README.txt) - Explaining contents and site information

The structure of dataset (each directory includes rs-FC file, demographic information file, and Readme file):

  SRPBS_FC
  ├── README.txt
  ├── ATR
  │   ├── HC
  │   ├── OCD
  │   └── OCD-oblique
  ├── Cambridge
  ├── CiNet
  ├── HiroshimaU
  ├── KPUM
  ├── KyotoU
  │   ├── DEP
  │   ├── HC
  │   └── SSD
  ├── OsakaU
  ├── ShowaU
  ├── TravelingSubjects
  └── UTO
      ├── UTO_GEMR750W_30_AAL
      ├── UTO_GEMR750W_30_BAL
      └── UTO_GEMR750W_30_R93

Reference

Please refer to our published paper for detailed methods; preprocessing and atlas information to generate functional connectivity matrix.
- Yahata, N., Morimoto, J., Hashimoto, R. et al. A small number of abnormal brain connections predicts adult autism spectrum disorder. Nat Commun 7, 11254 (2016). https://doi.org/10.1038/ncomms11254

Download

Data Download

* MD5 hash : ca16e4049f35a51622f104d24407d59b
* As file size is large ( 175.6MB ), downloading takes time.
* This file is stored in Amazon S3 Service.

Consortium Sites

ATR

ATR

Scanner :
Siemens
Participants :
Obsessive compulsive disorder (OCD) / Healthy controls (HC)
Number of Data :
OCD 4 / HC 108
Tokyo Univ.

University of Tokyo

Scanner :
GE, Philips
Participants :
Autism spectrum disorder (ASD) / Major depressive disorder (MDD) / Schizophrenia (SCZ) / Bipolar disorder (BPD) / Dysthymia / Other psychiatric disorders (Other) / Healthy controls (HC)
Number of Data :
ASD 10 / MDD 62 / SCZ 35 / BPD 41 / Dysthymia 4 / Other 28 / HC 170
Osaka Univ.

Osaka University

Scanner :
Siemens
Participants :
Intractable neuropathic pain (INP) / Post-stroke without pain (PSP) / Healthy controls (HC)
Number of Data :
INP 43 / PSP 10 / HC 29
Showa Univ.

Showa University

Scanner :
Siemens
Participants :
Autism spectrum disorder (ASD) / Schizophrenia (SCZ) / Healthy controls (HC)
Number of Data :
ASD 115 / SCZ 19 / HC 101
Kyoto Univ.

Kyoto University

Scanner :
Siemens
Participants :
Schizophrenia (SCZ) / Depression (DEP) / Healthy controls (HC)
Number of Data :
SCZ 92 / DEP 16 / HC 234
Hiroshima Univ.

Hiroshima University

Scanner :
GE, Siemens
Participants :
Depression (DEP) / Healthy controls (HC)
Number of Data :
DEP 173 / HC 261

Collaborative Sites

Kyoto Pref. Univ.

Kyoto Prefectural University of Medicine (KPUM)

Scanner :
Philips
Participants :
Obsessive compulsive disorder (OCD)
Number of Data :
OCD 9
CiNet

CiNet (NICT)

Scanner :
Siemens
Participants :
Back pain / Healthy controls (HC)
Number of Data :
33 (Cambridge University)
63 (CiNet)

Traveling Subjects Data

Traveling Subjects Data

History of update

  • (2021-4-15) Dataset was updated.
  • (2019-11-7) CiNet data updated.
  • (2018-5-31) Tokyo University data released.
  • (2018-5-14) Traveling subjects data released.
  • (2018-4-23) Osaka University, Showa University, Kyoto Prefectural University of Medicine data released.
  • (2017-4-23) ATR data updated.
  • (2018-4-13) Kyoto University data released.
  • (2018-4-6) Hiroshima University data released.
  • (2017-4-5) ATR data updated.
  • (2017-11-21) CiNet data released.
  • (2017-11-10) ATR data released.

Usage

How to download the data

We invite investigators to apply for access to these data. Before applying your request, please read the privacy statement. Note that we collect number of applicants, number of data downloading from the database for reports to DecNef Project at some moment without private information. The brain data is allowed to use for noncommercial purpose only. You are asked to email to us attached a form of "Application Form for Data Usage" after filling your information and requirements.

  • Application Form for Data Usage : PDF, WORD

You will be notified by email about how to access the database, where you may log in and download data to your computer. If you have any questions about the brain data, please contact us by email.

NOTE: i) everyone who works with these data must review and agree to these terms, including those who are accessing shared copies of this data. If you are sharing data, please advise your co-researchers that they must register with these data repository and agree to these terms.

Privacy Statement

The member of the DecNef Brain Database Project takes privacy very seriously, whether dealing with participants data or the data of those visiting this website.

The participant data from our research into the DecNef Brain Data Repository that is stored in our database system is de-identified, and contains no personal health information.

Our website may also collect non-personal data about site visits, sessions, and IP addresses. This information is only used for diagnostic or debugging purposes, to help us optimize our website's performance, and is not shared externally. This is a standard practice for most websites, and this data is never linked with personally identifiable information.

This website contains links to other websites, whose content we think is relevant. However, DecNef Brain Database website is not responsible for maintaining or updating the content of these other sites. If any of these sites are found to contain irrelevant or offensive information, please contact us.

By using the DecNef Brain Data Repository, you signify your agreement to our privacy policy as stated above. Note that this policy may be revised periodically without notice. Please re-read this privacy prior to submitting any personal information if you have concerns about how your information is being collected and used.